Table 4

Association between tSNP genotypes and the risk of glioma
SNP ID Genotype No. (frequency) Logistic regression
Case Control OR (95% CI) P value
rs12022378 CC 114(18.2) 87(13.6) 0.71(0.51-0.99) 0.0418
rs12022378 CT 265(42.2) 288(44.9) 1.01(0.8-1.29) 0.9127
rs12022378 TT 249(39.6) 267(41.6) 1(referent)
rs12917 TT 6(1) 10(1.6) 1.7(0.61-4.72) 0.3011
rs12917 TC 91(14.5) 115(17.9) 1.29(0.96-1.74) 0.0956
rs12917 CC 530(84.5) 519(80.6) 1(referent)
rs12645561 TT 43(6.8) 56(8.7) 1.26(0.83-1.93) 0.2784
rs12645561 TC 251(40) 241(37.6) 0.93(0.74-1.18) 0.5537
rs12645561 CC 334(53.2) 344(53.7) 1(referent)
rs7003908 CC 31(4.9) 43(6.7) 1.44(0.89-2.33) 0.1387
rs7003908 CA 201(32) 217(33.7) 1.12(0.88-1.42) 0.3536
rs7003908 AA 397(63.1) 383(59.6) 1(referent)
rs6010620 GG 75(11.9) 40(6.2) 0.46(0.31-0.7) 0.0002
rs6010620 GA 261(41.5) 267(41.5) 0.89(0.71-1.12) 0.3212
rs6010620 AA 293(46.6) 337(52.3) 1(referent)
rs2297440 CC 73(11.6) 40(6.2) 0.47(0.31-0.71) 0.0003
rs2297440 CT 263(41.8) 263(40.8) 0.86(0.68-1.08) 0.1902
rs2297440 TT 293(46.6) 342(53) 1(referent)
rs4809324 CC 11(1.8) 7(1.1) 0.62(0.24-1.6) 0.3162
rs4809324 CT 129(20.5) 133(20.7) 1(0.76-1.31) 0.9901
rs4809324 TT 488(77.7) 504(78.3) 1(referent)
rs2992 AA 126(20.1) 117(18.2) 0.98(0.71-1.35) 0.9003
rs2992 AG 292(46.5) 328(50.9) 1.19(0.92-1.52) 0.1822
rs2992 GG 210(33.4) 199(30.9) 1(referent)
rs3770502 AA 12(1.9) 15(2.3) 1.18(0.54-2.54) 0.6809
rs3770502 AG 177(28.1) 161(25) 0.86(0.67-1.1) 0.2198
rs3770502 GG 440(70) 468(72.7) 1(referent)
rs9288516 AA 128(20.4) 153(23.8) 1.28(0.93-1.74) 0.1249
rs9288516 AT 308(49.1) 312(48.4) 1.08(0.84-1.4) 0.5539
rs9288516 TT 191(30.5) 179(27.8) 1(referent)

OR odd ratio, CI confidence interval.

Li et al.

Li et al. Diagnostic Pathology 2013 8:83   doi:10.1186/1746-1596-8-83

Open Data