Table 3

Tagging SNPs information that were examined
SNP No. Gene chr Position MA MAF (CHB) MAF HWE P P OR (95%CI) P adj. Genotype rate
Case Control
rs12022378 AP4B1 chr1 114448389 C 0.411 0.360 0.393 0.4943 0.0889 1.15(0.98-1.35) 0.889 99.34
rs12917 MGMT chr10 131506283 T 0.31 0.105 0.082 0.2082 0.0497 0.76(0.58-1) 0.497 99.67
rs12645561 NEIL3 chr4 178260872 T 0.114 0.275 0.268 0.1388 0.6903 0.97(0.81-1.15) 6.903 99.34
rs7003908 PRKDC chr8 48770702 C 0.283 0.236 0.209 0.1246 0.1074 0.86(0.71-1.03) 1.074 99.83
rs6010620 RTEL1 chr20 62309839 G 0.393 0.269 0.327 0.194 0.0016 1.32(1.11-1.56) 0.016 99.83
rs2297440 RTEL1 chr20 62312299 C 0.226 0.266 0.325 0.3127 0.001 1.33(1.12-1.58) 0.01 100
rs4809324 RTEL1 chr20 62318220 C 0.12 0.114 0.120 0.6994 0.6328 1.06(0.83-1.35) 6.328 99.67
rs2992 UBXN6 chr19 4443046 A 0.295 0.436 0.433 0.4229 0.8701 0.99(0.84-1.16) 8.701 99.67
rs3770502 XRCC5 chr2 217045059 A 0.208 0.148 0.160 0.7558 0.4221 1.09(0.88-1.36) 4.221 99.83
rs9288516 XRCC5 chr2 217053264 A 0.489 0.480 0.450 0.4774 0.1288 0.89(0.76-1.04) 1.288 99.67

Li et al.

Li et al. Diagnostic Pathology 2013 8:83   doi:10.1186/1746-1596-8-83

Open Data